I have extensive experience with genomic data analysis tools such as BWA, GATK, and SAMtools, as well as platforms like Galaxy and Illumina BaseSpace. I’ve used these tools to align sequencing data, perform variant calling, and interpret results. Additionally, I am proficient in scripting with Python and R to automate workflows and analyze large datasets. My experience ensures I can efficiently troubleshoot and optimize genomic data pipelines while supporting researchers in achieving their goals.

I would start by understanding their research objectives and assessing their current knowledge of genomics. I’d provide tailored guidance on selecting appropriate tools, designing experiments, and interpreting results. I’d also offer hands-on training for software and workflows, ensuring they feel confident. Additionally, I’d create clear documentation and be available for follow-up questions. My goal is to empower researchers by simplifying complex concepts and providing ongoing support to ensure their project’s success.

In a previous role, a researcher encountered errors during variant calling using GATK. I reviewed their workflow and identified misconfigured parameters in the HaplotypeCaller step. After correcting the settings and re-running the pipeline, the issue was resolved. I also documented the solution and provided training to prevent similar issues. This experience highlights my problem-solving skills and ability to communicate technical solutions effectively, ensuring smooth genomic data processing for end-users.

I stay updated by regularly reading journals like Nature Genetics and Bioinformatics, attending webinars, and participating in conferences such as ASHG and ISMB. I also follow key researchers and organizations on social media and engage in online forums like Biostars. Additionally, I experiment with new tools and workflows in my personal projects. This proactive approach ensures I remain knowledgeable about emerging technologies and can provide cutting-edge support to researchers.

I prioritize tasks by assessing urgency, complexity, and impact on research outcomes. I use project management tools like Trello to track progress and set clear timelines. For urgent requests, I address them immediately, while longer-term projects are scheduled systematically. I also communicate regularly with researchers to manage expectations and adjust priorities as needed. This structured approach ensures all projects receive timely support without compromising quality.